Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PUV_04540Putative uncharacterized protein. (226 aa)    
Predicted Functional Partners:
dusC
tRNA-dihydrouridine synthase C.
  
  
 0.715
prmA
Ribosomal protein L11 methyltransferase.
  
    0.593
TrkG
Trk system potassium uptake protein TrkG.
       0.547
TrkA1
Trk system potassium uptake protein TrkA homolog 1.
       0.539
PUV_04520
Putative uncharacterized protein.
       0.485
PUV_01250
UPF0276 protein Anae109_1558.
   
    0.464
tycC
Tyrocidine synthase 3.
   
 
 0.455
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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