Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUV_08060Putative uncharacterized protein. (669 aa)    
Predicted Functional Partners:
PUV_08070
Putative uncharacterized protein.
       0.741
PUV_02230
Putative uncharacterized protein.
  
     0.735
PUV_12280
Putative uncharacterized protein.
  
     0.729
PUV_08080
Putative uncharacterized protein.
       0.707
scc3-B
Type III secretion specific chlamydia chaperone 3.
  
     0.707
PUV_00220
Putative uncharacterized protein.
  
     0.693
PUV_25710
Putative uncharacterized protein.
  
     0.692
PUV_08190
Putative uncharacterized protein.
  
     0.691
PUV_25380
Putative uncharacterized protein.
  
     0.691
PUV_25360
Putative uncharacterized protein.
  
     0.647
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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