Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUV_20060Putative uncharacterized protein. (166 aa)    
Predicted Functional Partners:
PUV_20050
UPF0365 protein pc1737.
 
  
 0.984
PUV_20070
Putative uncharacterized protein.
 
    
0.857
PUV_20040
Putative uncharacterized protein.
       0.773
PUV_00350
Putative uncharacterized protein.
  
     0.595
PUV_20080
Putative uncharacterized protein.
       0.572
PUV_00340
Putative ATP:guanido phosphotransferase CPn_0701/CP_0045/CPj0701/CpB0728.
  
     0.551
PUV_20030
Putative uncharacterized protein.
       0.541
PUV_20020
UPF0001 protein aq_274; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.432
PUV_00530
Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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