Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUV_22290Putative uncharacterized protein. (147 aa)    
Predicted Functional Partners:
PUV_24240
Putative uncharacterized protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.995
btrV
Putative anti-sigma factor antagonist BtrV; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.969
PUV_22300
Putative uncharacterized protein.
       0.807
PUV_22310
Putative uncharacterized protein.
       0.807
cheY
Chemotaxis response regulator CheY.
 
 
 0.747
pkn5
ser/Thr protein kinase.
  
 
 0.730
dnaE
DNA polymerase III subunit alpha.
     
 0.618
sctQ,
Type III secretion basal body protein.
  
    0.418
cheA1
Chemotaxis protein histidine kinase and related kinases CheA.
 
  
 0.417
cheA2
Chemotaxis protein histidine kinase and related kinases CheA.
 
  
 0.406
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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