Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PUV_22360Putative uncharacterized protein. (783 aa)    
Predicted Functional Partners:
sctV,
Type III secretion integral inner membrane protein.
  
  
 0.688
PUV_24240
Putative uncharacterized protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.679
sucA
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.670
PUV_22370
Unknown protein.
       0.594
sctJ-A
Type III secretion periplasmic lipoprotein.
  
  
 0.559
sctJ-B
Type III secretion periplasmic lipoprotein.
  
  
 0.559
sctT,
Type III secretion integral inner membrane protein.
  
  
 0.551
sctQ,
Type III secretion basal body protein.
  
 
 0.546
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 
 0.521
sctR,
Type III secretion integral inner membrane protein.
  
  
 0.520
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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