Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUV_27140Putative uncharacterized protein. (381 aa)    
Predicted Functional Partners:
PUV_27160
Putative uncharacterized protein.
 
  
 0.968
PUV_27150
Uncharacterized ABC transporter ATP-binding protein MJ1508.
 
 
 0.941
PUV_17300
Putative uncharacterized protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.857
PUV_27170
Putative uncharacterized protein.
 
 
 0.834
PUV_17310
Uncharacterized ABC transporter ATP-binding protein MJ0796.
 
 
 0.744
PUV_27180
Unknown protein.
       0.651
PUV_27130
Putative uncharacterized protein.
       0.588
osmy
Putative hyperosmoticaLLy inducible periplasmic protein.
  
     0.565
lolD
Lipoprotein-releasing system ATP-binding protein LolD.
  
 
 0.560
PUV_21240
Uncharacterized ABC transporter ATP-binding protein MJ0796.
  
 
 0.560
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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