STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150UVL4GAF domain-containing protein. (175 aa)    
Predicted Functional Partners:
A0A150VH74
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
 
      0.558
A0A150UYB1
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
    
 
 0.511
A0A150V9A4
S4 RNA-binding domain-containing protein.
 
      0.454
A0A150VBS2
CN hydrolase domain-containing protein.
 
      0.447
A0A150VGF9
Aspartate aminotransferase.
   
 
  0.427
A0A150UU53
3Beta_HSD domain-containing protein.
   
 
  0.418
A0A150V2C4
3Beta_HSD domain-containing protein.
   
 
  0.418
M433DRAFT_5100
3Beta_HSD domain-containing protein.
   
 
  0.418
A0A150VEI1
Epimerase domain-containing protein.
   
 
  0.418
A0A150V8C3
PMSR domain-containing protein.
    
 
 0.410
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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