STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150UWN8UBIQUITIN_CONJUGAT_2 domain-containing protein. (303 aa)    
Predicted Functional Partners:
A0A150V1G1
Uncharacterized protein.
    
 0.974
A0A150VC95
E3 ubiquitin protein ligase.
    
 0.972
M433DRAFT_3558
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.967
A0A150UUZ2
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.918
A0A150UWJ4
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.893
A0A150UPB1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.834
A0A150UWV6
Vezatin domain-containing protein.
   
 0.834
A0A150V404
Ubiquitin-like domain-containing protein.
    
 0.834
A0A150V9F9
BZIP domain-containing protein.
    
 0.834
M433DRAFT_3096
CIA30 domain-containing protein.
    
 0.834
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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