STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150UYR2Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
A0A150USU7
Uncharacterized protein.
   
 0.984
A0A150VER8
TPR_REGION domain-containing protein.
 
 
    0.934
A0A150V6E9
Deacetylase sirtuin-type domain-containing protein.
    
 0.899
M433DRAFT_7985
Uncharacterized protein.
   
  
 0.830
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.814
A0A150UZT3
Uncharacterized protein.
   
    0.780
A0A150V802
Brix domain-containing protein.
   
    0.779
A0A150VIZ1
Uncharacterized protein.
   
    0.776
A0A150UVD4
Brix domain-containing protein.
   
    0.773
A0A150V0Z9
WD_REPEATS_REGION domain-containing protein.
   
    0.772
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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