STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150UYU5Uncharacterized protein; Belongs to the DEAD box helicase family. (643 aa)    
Predicted Functional Partners:
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.940
M433DRAFT_8045
Sas10 domain-containing protein.
   
  0.917
A0A150VBY6
U3 small nucleolar RNA-associated protein 22.
   
  0.903
M433DRAFT_2428
Uncharacterized protein.
   
   0.896
A0A150USD8
Uncharacterized protein.
   
 0.887
A0A150UU00
Uncharacterized protein.
  
0.881
A0A150VDN3
Uncharacterized protein.
  
 
0.876
M433DRAFT_324
Rsa3 domain-containing protein.
   
 
 0.865
M433DRAFT_7375
Urb2 domain-containing protein.
   
 
 0.863
A0A150UUQ1
Uncharacterized protein.
   
 0.861
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.