STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150V2B6TFIIS central domain-containing protein. (860 aa)    
Predicted Functional Partners:
M433DRAFT_4084
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.943
A0A150VAP2
Uncharacterized protein.
    
  0.921
M433DRAFT_2557
Sister chromatid cohesion protein.
   
  
 0.908
A0A150VG73
RPOLD domain-containing protein.
    
  0.870
A0A150VBV1
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
  0.818
A0A150UWK5
Uncharacterized protein.
    
 0.815
A0A150VBX3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.811
A0A150VGV2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.795
M433DRAFT_274
RNA_pol_L_2 domain-containing protein.
    
 0.788
A0A150UTY0
Uncharacterized protein.
    
  0.787
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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