STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150V751Uncharacterized protein. (546 aa)    
Predicted Functional Partners:
A0A150VDK8
Uncharacterized protein.
    
 0.620
A0A150VH02
Uncharacterized protein.
    
  0.619
A0A150UWP7
Uncharacterized protein.
    
 0.559
A0A150V5E3
SUN domain-containing protein.
    
 0.543
A0A150V9U8
SCA7 domain-containing protein.
    
 0.540
A0A150V7M5
Uncharacterized protein.
    
 0.520
A0A150VAW7
Uncharacterized protein.
    
 0.516
A0A150VJW5
Uridine kinase; Belongs to the uridine kinase family.
    
 0.516
A0A150UZJ4
TFIID_20kDa domain-containing protein.
    
 0.511
A0A150VJ88
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.505
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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