STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150V9K6L-type lectin-like domain-containing protein. (321 aa)    
Predicted Functional Partners:
A0A150V2H7
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.817
A0A150V106
DUF2040 domain-containing protein.
 
      0.801
A0A150V4U0
GOLD domain-containing protein.
   
 0.800
A0A150VHS2
GOLD domain-containing protein.
   
 0.791
A0A150V899
Uncharacterized protein.
   
 0.746
A0A150VG03
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.729
A0A150VA81
Uncharacterized protein.
    
 0.715
A0A150VEK2
GRASP55_65 domain-containing protein.
   
  0.715
A0A150UYG2
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.712
A0A150UZJ1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 
 0.707
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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