STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A150VH33Uncharacterized protein; Belongs to the DEAD box helicase family. (494 aa)    
Predicted Functional Partners:
M433DRAFT_8045
Sas10 domain-containing protein.
   
  0.999
A0A150VGB3
WD_REPEATS_REGION domain-containing protein.
   
 0.997
A0A150UU00
Uncharacterized protein.
  
0.996
A0A150UXL8
Uncharacterized protein.
   
 0.996
A0A150UTT9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.995
A0A150UX44
Uncharacterized protein.
   
 0.994
A0A150UVV9
Uncharacterized protein.
   
 0.993
A0A150UY76
WD_REPEATS_REGION domain-containing protein.
   
 0.991
A0A150UUK8
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
0.990
A0A150UYB6
DRIM domain-containing protein.
   
 0.989
Your Current Organism:
Acidomyces richmondensis
NCBI taxonomy Id: 766039
Other names: A. richmondensis BFW, Acidomyces richmondensis BFW
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