STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEF97717.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (626 aa)    
Predicted Functional Partners:
OEF95722.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.783
OEF97718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.636
OEF96684.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.632
OEF96648.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.627
OEF97722.1
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.615
OEF95770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.596
OEF97736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.591
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 0.585
OEF98562.1
Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  0.584
OEF98700.1
4-hydroxybenzoate octaprenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family.
  
 0.584
Your Current Organism:
Desulfuribacillus alkaliarsenatis
NCBI taxonomy Id: 766136
Other names: D. alkaliarsenatis, DSM 24608, Desulfuribacillus alkaliarsenatis Sorokin et al. 2014, UNIQEM U855, low GC Gram-positive bacterium strain AHT28, strain AHT28
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