STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_00115COG0687 Spermidine/putrescine-binding periplasmic protein. (339 aa)    
Predicted Functional Partners:
C357_00120
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.998
C357_06299
spermidine-ABC transporter, permease component, putative; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.993
C357_12114
Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II; overlaps another CDS with the same product name.
 
 0.993
C357_00125
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.984
C357_00130
Polyamine ABC transporter, ATP-binding component, putative; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.977
C357_12119
Binding-protein-dependent transport systems inner membrane component; COG1176 ABC-type spermidine/putrescine transport system, permease component I; overlaps another CDS with the same product name.
 
 0.950
C357_06304
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.943
C357_20015
ABC transporter, membrane spanning protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.943
C357_20010
Putative transmembrane component of ABC transporter; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.932
C357_02209
Binding-protein-dependent transport systems inner membrane component precursor; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.925
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.