STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_00264Endoribonuclease L-PSP family protein; COG0251 Putative translation initiation inhibitor, yjgF family. (112 aa)    
Predicted Functional Partners:
C357_12844
COG0480 Translation elongation factors (GTPases).
    
  0.793
C357_01959
Hypothetical protein; COG0251 Putative translation initiation inhibitor, yjgF family.
  
     0.755
C357_00269
ABC transporter, nucleotide binding/ATPase protein (amino acid); COG1126 ABC-type polar amino acid transport system, ATPase component.
       0.705
C357_00274
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
       0.705
C357_00279
COG4597 ABC-type amino acid transport system, permease component.
       0.551
C357_00284
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
    0.551
C357_00289
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
    0.487
rph
COG0689 RNase PH.
  
   0.452
C357_00524
COG0117 Pyrimidine deaminase.
  
   0.424
C357_13255
YjeF family protein.
  
    0.401
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.