STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_00284Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (342 aa)    
Predicted Functional Partners:
C357_00279
COG4597 ABC-type amino acid transport system, permease component.
 
 
 0.998
C357_00274
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
 0.997
C357_00269
ABC transporter, nucleotide binding/ATPase protein (amino acid); COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.966
C357_18821
COG0765 ABC-type amino acid transport system, permease component.
 
 0.942
C357_18826
Glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein; COG4597 ABC-type amino acid transport system, permease component.
 
 
 0.932
C357_18816
ABC transporter-like protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.926
C357_18662
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
   
 0.893
C357_09772
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.882
C357_18572
Sensor histidine kinase/response regulator GacS; COG0642 Signal transduction histidine kinase.
   
 0.866
C357_17635
Hypothetical protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
     
 0.865
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.