STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_01795Peptidase M48; COG4783 Putative Zn-dependent protease, contains TPR repeats. (241 aa)    
Predicted Functional Partners:
C357_16386
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
 0.758
C357_00150
COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
  0.685
C357_01800
Hypothetical protein.
 
     0.630
C357_03305
Hypothetical protein; COG4942 Membrane-bound metallopeptidase.
 
 
   0.604
C357_04989
COG0082 Chorismate synthase.
  
    0.545
C357_01595
MCP methyltransferase, CheR-type; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
 0.515
C357_19146
Hemolysin-type calcium-binding region; COG2931 RTX toxins and related Ca2+-binding proteins.
   
   0.490
C357_01790
Hypothetical protein.
       0.489
C357_13822
Hypothetical protein.
  
     0.487
C357_01780
Hypothetical protein.
       0.463
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.