STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_01994Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily. (321 aa)    
Predicted Functional Partners:
C357_01999
Hypothetical protein.
 
     0.932
C357_06237
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
    
 0.671
C357_18085
COG2721 Altronate dehydratase.
    
 0.669
C357_20697
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
    
 0.615
C357_01984
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
 
     0.541
C357_12881
2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
  
 
 0.540
C357_17423
2-dehydro-3-deoxygalactonokinase, putative; COG3734 2-keto-3-deoxy-galactonokinase.
  
 
 0.540
C357_15881
COG2124 Cytochrome P450.
  
  
 0.526
C357_16226
Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase NahE; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
    
 0.526
C357_20285
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
    
 0.526
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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