STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_02004COG2301 Citrate lyase beta subunit. (319 aa)    
Predicted Functional Partners:
C357_21990
Hypothetical protein; COG2030 Acyl dehydratase.
 
 
 0.870
C357_16081
Hydro-lyase; COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; overlaps another CDS with the same product name.
    
 0.830
C357_16086
Hydro-lyase; COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; overlaps another CDS with the same product name.
    
 0.830
C357_10207
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
 0.736
C357_11729
Class II aldolase/adducin family protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
   
    0.733
C357_18971
Hypothetical protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
   
    0.733
C357_10202
COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
 
 0.723
C357_13637
COG0281 Malic enzyme.
  
 
 0.717
C357_15081
COG0281 Malic enzyme.
  
 
 0.717
C357_20260
COG2225 Malate synthase.
    
 0.712
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.