STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_02084Hypothetical protein; COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives. (195 aa)    
Predicted Functional Partners:
C357_02089
Putative thiol-disulfide oxidoreductase D; COG1651 Protein-disulfide isomerase.
 
     0.881
C357_02094
L-carnitine dehydratase/bile acid-inducible protein F; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase.
       0.774
C357_02079
COG1194 A/G-specific DNA glycosylase.
       0.723
C357_13992
Hypothetical protein.
  
     0.709
C357_05648
DnaJ domain-containing protein; COG2214 DnaJ-class molecular chaperone.
  
     0.634
C357_02886
Tim44 family protein; COG4395 Uncharacterized protein conserved in bacteria.
  
     0.610
C357_10187
Helicase, ATP-dependent, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
     0.561
C357_14851
Hypothetical protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
     0.561
C357_01490
Hypothetical protein.
  
     0.542
C357_21525
Hypothetical protein.
  
     0.523
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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