STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_02214Hypothetical protein; COG0687 Spermidine/putrescine-binding periplasmic protein. (411 aa)    
Predicted Functional Partners:
C357_02219
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.969
C357_02209
Binding-protein-dependent transport systems inner membrane component precursor; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.968
C357_02204
ABC spermidine/putrescine transporter, inner membrane subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.967
C357_21790
Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 
 0.918
C357_02199
COG4126 Hydantoin racemase.
 
     0.875
C357_02229
Hypothetical protein; COG1802 Transcriptional regulators.
 
     0.817
C357_11764
COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
   
 
 0.772
C357_18637
Binding-protein-dependent transport systems inner membrane component; COG4176 ABC-type proline/glycine betaine transport system, permease component.
   
 
 0.772
C357_13772
Metal transport system ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
     
 0.761
C357_00125
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  
 
 0.750
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.