Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C357_02406Putative signal peptide protein; COG3489 Predicted periplasmic lipoprotein. (325 aa)    
Predicted Functional Partners:
C357_02411
Hypothetical protein; COG3488 Predicted thiol oxidoreductase.
 
  
 0.989
C357_02401
COG3490 Uncharacterized protein conserved in bacteria.
 
  
 0.981
C357_02426
Putative lipoprotein; COG3487 Uncharacterized iron-regulated protein.
 
    0.972
C357_02421
Putative bacterioferritin-associated ferredoxin; COG1251 NAD(P)H-nitrite reductase.
 
    0.822
C357_02416
COG2193 Bacterioferritin (cytochrome b1).
       0.766
C357_02936
Hypothetical protein.
  
     0.587
C357_02391
Hypothetical protein.
       0.551
C357_02396
Hypothetical protein; COG0053 Predicted Co/Zn/Cd cation transporters.
       0.551
C357_02811
Hypothetical protein.
  
     0.528
C357_02431
Hypothetical protein.
       0.499
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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