STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_02561Two component, sigma54 specific, Fis family transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (407 aa)    
Predicted Functional Partners:
C357_16386
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 0.991
C357_02566
COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 0.971
C357_01595
MCP methyltransferase, CheR-type; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 0.950
C357_18662
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
  
 0.932
C357_18572
Sensor histidine kinase/response regulator GacS; COG0642 Signal transduction histidine kinase.
  
 0.919
C357_18657
COG0642 Signal transduction histidine kinase.
 
 0.900
C357_21222
Nitrogen regulation protein NtrB; COG3852 Signal transduction histidine kinase, nitrogen specific.
 0.865
C357_16376
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.829
C357_21212
Nitrogen regulation protein ntrY, putative; COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation.
 0.790
C357_22585
Sensor histidine kinase/response regulator receiver protein; COG0642 Signal transduction histidine kinase.
 
 0.779
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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