STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_03171COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (212 aa)    
Predicted Functional Partners:
C357_03785
ATP synthase FliI/YscN; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
  
 0.550
C357_22200
COG1360 Flagellar motor protein.
 
  
 0.520
C357_03176
COG0629 Single-stranded DNA-binding protein.
       0.506
C357_03166
COG1858 Cytochrome c peroxidase.
       0.482
fliE
COG1677 Flagellar hook-basal body protein.
  
  
 0.453
C357_16756
OmpA family domain-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.422
C357_04884
M24/M37 family peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
 
   
 0.419
flgF
COG4786 Flagellar basal body rod protein.
 
   0.409
C357_16953
OmpA/MotB domain-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.409
C357_06249
COG0466 ATP-dependent Lon protease, bacterial type.
  
     0.401
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.