STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_03420ABC transporter-like protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component. (265 aa)    
Predicted Functional Partners:
C357_03415
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
  0.996
C357_17720
COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
  0.980
C357_22545
COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
  0.979
C357_19286
COG0559 Branched-chain amino acid ABC-type transport system, permease components.
 
 0.969
C357_09707
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
  0.960
C357_18397
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
  0.954
C357_03410
Hypothetical protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components.
 
  0.947
C357_10247
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component; overlaps another CDS with the same product name.
 
  0.895
C357_03425
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 
0.893
C357_08615
Urea or short-chain amide ABC transporter; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
  0.892
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.