Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C357_03460COG2086 Electron transfer flavoprotein, beta subunit. (252 aa)    
Predicted Functional Partners:
C357_03455
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.999
C357_14217
Electrotransfer ubiquinone oxidoreductase family protein; COG0644 Dehydrogenases (flavoproteins).
 
 0.999
C357_09672
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.998
C357_09274
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
   
 
 0.832
C357_05857
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 
 0.826
C357_03610
Fatty acid oxidation complex alpha subunit, putative; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.825
C357_06439
COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I).
  
 0.818
C357_18132
4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.
    
  0.774
C357_15881
COG2124 Cytochrome P450.
  
 
 0.771
C357_03800
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.770
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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