STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_03500ATP:cob(I)alamin adenosyltransferase. (190 aa)    
Predicted Functional Partners:
C357_12034
Bifunctional cobinamide kinase/cobinamide phosphate guanyltransferase protein CobP; COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase.
    
 0.959
C357_19161
cob(I)yrinic acid a,c-diamide adenosyltransferase; COG2109 ATP:corrinoid adenosyltransferase.
    
 0.942
C357_12024
Hypothetical protein.
    
 0.919
C357_15501
COG1492 Cobyric acid synthase.
  
 
 0.915
cobN
Cobaltochelatase subunit CobN; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
    
 0.914
C357_09363
COG1797 Cobyrinic acid a,c-diamide synthase.
    
 0.913
C357_12044
COG1270 Cobalamin biosynthesis protein CobD/CbiB.
    
 0.913
C357_03495
Hypothetical protein.
  
    0.859
metH
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
 
   
 0.761
C357_03490
Putative oxidoreductase NAD-/NADP-dependent; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.744
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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