STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_04090COG0477 Permeases of the major facilitator superfamily. (394 aa)    
Predicted Functional Partners:
C357_04095
Hypothetical protein.
       0.737
C357_09154
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
    
 0.648
C357_09797
EmrB/QacA family drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.603
C357_14369
Nitrite extrusion protein; COG2223 Nitrate/nitrite transporter.
     
 0.590
C357_04100
GGDEF/EAL domain-containing protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
     0.564
C357_06699
COG0136 Aspartate-semialdehyde dehydrogenase.
   
 0.539
C357_10682
COG1435 Thymidine kinase.
    
 0.535
C357_09339
COG0460 Homoserine dehydrogenase.
    
  0.515
argD
Acetylornithine transaminase protein; COG4992 Ornithine/acetylornithine aminotransferase.
  
 
 0.488
C357_20260
COG2225 Malate synthase.
     
 0.484
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.