STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_04437COG0703 Shikimate kinase. (191 aa)    
Predicted Functional Partners:
aroB
COG0337 3-dehydroquinate synthetase.
 
 0.999
aroE
COG0169 Shikimate 5-dehydrogenase.
 
 0.998
C357_20430
3-phosphoshikimate 1-carboxyvinyltransferase; COG0128 5-enolpyruvylshikimate-3-phosphate synthase.
 
 
 0.991
C357_03006
COG0757 3-dehydroquinate dehydratase II.
  
 0.972
C357_04989
COG0082 Chorismate synthase.
 
 
 0.932
C357_03395
COG0287 Prephenate dehydrogenase.
 
 
 0.831
C357_00589
COG0077 Prephenate dehydratase.
 
  
 0.771
C357_04657
COG0512 Anthranilate/para-aminobenzoate synthases component II.
 
  
 0.692
C357_04182
COG1605 Chorismate mutase.
  
 
 0.668
C357_15576
COG1605 Chorismate mutase.
  
 
 0.668
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.