STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_04592Cytochrome c-type biogenesis protein CcmF; COG1138 Cytochrome c biogenesis factor. (655 aa)    
Predicted Functional Partners:
C357_04597
COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes.
  
 0.998
C357_17545
Thiol:disulfide interchange protein cycY, putative; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.985
C357_02139
Cytochrome c-type biogenesis protein CycH; COG4235 Cytochrome c biogenesis factor.
 
 
 0.963
C357_05847
COG2332 Cytochrome c-type biogenesis protein CcmE.
 
 
 0.951
C357_17535
Heme exporter protein CcmC; COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.896
C357_17520
Heme exporter protein CcmB; COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.883
C357_07326
Periplasmic protein thiol--disulfide oxidoreductase DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.784
C357_17515
COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component.
 
   
 0.746
C357_04582
Hypothetical protein; COG3926 Putative secretion activating protein.
       0.670
C357_04587
Hypothetical protein.
       0.670
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.