STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_04797COG1495 Disulfide bond formation protein DsbB. (155 aa)    
Predicted Functional Partners:
C357_04802
DedA family protein; COG1238 Predicted membrane protein.
       0.856
C357_02886
Tim44 family protein; COG4395 Uncharacterized protein conserved in bacteria.
  
     0.675
C357_02089
Putative thiol-disulfide oxidoreductase D; COG1651 Protein-disulfide isomerase.
 
 
 0.612
C357_06142
COG0516 IMP dehydrogenase/GMP reductase.
   
 
 0.583
C357_10667
Twin-arginine translocation signal domain protein; COG1651 Protein-disulfide isomerase.
 
 
 0.579
C357_13727
Putative cytoplasmic protein; COG3820 Uncharacterized protein conserved in bacteria.
  
     0.579
C357_16546
rpsU-divergently transcribed protein.
  
     0.565
C357_04427
Hypothetical protein.
 
 
 0.553
C357_04872
27 kDa outer membrane protein, putative; COG1651 Protein-disulfide isomerase.
 
 
 0.539
C357_19501
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
     
  0.499
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.