STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_05079Hypothetical protein. (220 aa)    
Predicted Functional Partners:
C357_01730
Hypothetical protein.
  
  
 0.879
rpmH
COG0230 Ribosomal protein L34.
  
  
 0.879
C357_01715
Putative inner membrane protein translocase component YidC; COG0706 Preprotein translocase subunit YidC.
  
  
 0.874
rplD
COG0088 Ribosomal protein L4.
   
  
 0.861
rplC
COG0087 Ribosomal protein L3.
   
  
 0.847
rpsJ
COG0051 Ribosomal protein S10.
   
    0.840
rpsL
COG0048 Ribosomal protein S12.
   
    0.839
C357_13410
50S ribosomal protein L21/unknown domain fusion protein; COG0261 Ribosomal protein L21.
  
    0.836
rpsT
COG0268 Ribosomal protein S20.
  
    0.832
rplF
COG0097 Ribosomal protein L6P/L9E.
   
    0.811
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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