Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C357_05723DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. (212 aa)    
Predicted Functional Partners:
C357_05703
Flavin-containing monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
 
     0.826
C357_05733
Putative glutamine amidotransferase protein; COG0067 Glutamate synthase domain 1.
 
     0.818
C357_05738
FwdC/FmdC family protein; COG0070 Glutamate synthase domain 3.
 
     0.817
C357_05708
Glycine cleavage system T protein.
 
     0.796
C357_05743
COG0069 Glutamate synthase domain 2.
 
     0.792
C357_05748
COG0174 Glutamine synthetase.
 
    0.770
C357_05718
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 0.648
C357_05768
COG4583 Sarcosine oxidase gamma subunit.
 
     0.633
C357_16151
Putative cyclase; COG1878 Predicted metal-dependent hydrolase.
  
    0.617
C357_04030
Hypothetical protein.
  
    0.595
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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