STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_06097COG1530 Ribonucleases G and E. (968 aa)    
Predicted Functional Partners:
C357_21750
COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase).
  
 0.976
C357_04837
Hypothetical protein.
    
 0.909
eno
Phosphopyruvate hydratase; COG0148 Enolase.
    
 0.909
C357_21500
COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism.
   
 
 0.901
C357_11694
DEAD/DEAH box helicase-like protein; COG0513 Superfamily II DNA and RNA helicases.
    
 0.826
C357_06284
COG0513 Superfamily II DNA and RNA helicases.
    
 0.824
C357_11944
DEAD-box ATP dependent DNA helicase; COG0513 Superfamily II DNA and RNA helicases.
    
 0.731
C357_01735
COG0594 RNase P protein component.
   
 
 0.729
C357_05079
Hypothetical protein.
   
 
 0.729
rho
COG1158 Transcription termination factor.
  
  
 0.685
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.