STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_06339Aminotransferase class V; COG0520 Selenocysteine lyase. (491 aa)    
Predicted Functional Partners:
C357_21282
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 0.987
C357_01725
PP-loop protein; COG0037 Predicted ATPase of the superfamily implicated in cell cycle control.
 
     0.913
C357_10582
COG2166 SufE protein probably involved in Fe-S center assembly.
  
 0.867
C357_08890
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
  
 0.853
C357_06334
NreB protein, putative; COG0477 Permeases of the major facilitator superfamily.
 
     0.820
C357_08865
Cysteine desulfurase activator complex subunit SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.777
C357_08895
FeS assembly protein SufD, putative; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.768
C357_09274
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
    
  0.759
C357_06344
COG1522 Transcriptional regulators.
 
     0.750
C357_06329
Oxidoreductase, putative; COG2072 Predicted flavoprotein involved in K+ transport.
 
     0.748
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.