STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_06369COG3008 Paraquat-inducible protein B. (704 aa)    
Predicted Functional Partners:
C357_06374
COG2995 Uncharacterized paraquat-inducible protein A; overlaps another CDS with the same product name.
  
 0.986
C357_06364
Hypothetical protein.
 
   
 0.970
C357_06379
COG2995 Uncharacterized paraquat-inducible protein A; overlaps another CDS with the same product name.
 
  
 0.968
C357_06384
COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily.
       0.553
C357_06389
Pantothenate kinase; COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor.
       0.553
C357_06394
COG0340 Biotin-(acetyl-CoA carboxylase) ligase.
       0.553
C357_09997
Hypothetical protein; COG0260 Leucyl aminopeptidase.
  
     0.434
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.