Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C357_06384COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily. (554 aa)    
Predicted Functional Partners:
C357_06394
COG0340 Biotin-(acetyl-CoA carboxylase) ligase.
      0.930
C357_06389
Pantothenate kinase; COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor.
       0.852
C357_17053
Trans-hexaprenyltranstransferase; COG0142 Geranylgeranyl pyrophosphate synthase.
  
    0.765
C357_21830
Geranyltranstransferase; COG0142 Geranylgeranyl pyrophosphate synthase.
  
    0.765
C357_20285
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
  
 0.673
C357_06399
COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N).
  
    0.671
C357_06404
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
       0.665
C357_06409
COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
       0.665
C357_06414
COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K).
       0.665
tolB
Translocation protein TolB; COG0823 Periplasmic component of the Tol biopolymer transport system.
      0.639
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (24%) [HD]