STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_07186VirB8 family protein; COG3736 Type IV secretory pathway, component VirB8. (218 aa)    
Predicted Functional Partners:
C357_07206
CagE TrbE VirB component of type IV transporter system; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.999
C357_07176
Conjugation TrbI family protein; COG2948 Type IV secretory pathway, VirB10 components.
 
  
 0.993
C357_07181
Conjugal transfer protein TrbG/VirB9/CagX; COG3504 Type IV secretory pathway, VirB9 components.
 
  
 0.993
C357_07211
Type IV secretory pathway VirB3 family protein.
  
 
 0.993
C357_07156
TrbL/VirB6 plasmid conjugal transfer protein; COG3704 Type IV secretory pathway, VirB6 components.
 
  
 0.992
C357_07191
Hypothetical protein.
 
     0.961
C357_07196
Lytic transglycosylase, catalytic; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
   
 0.927
C357_07216
Conjugal transfer protein TrbC.
 
   
 0.920
C357_07171
Type II secretion system protein E; COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
 
     0.891
C357_07226
Hypothetical protein.
 
     0.849
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.