Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C357_07331COG2010 Cytochrome c, mono- and diheme variants. (88 aa)    
Predicted Functional Partners:
C357_19341
Cytochrome-c oxidase chain II/c precursor; COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 0.966
C357_04202
COG3258 Cytochrome c.
   
 0.959
C357_05019
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; COG0723 Rieske Fe-S protein.
  
 0.941
C357_05014
COG1290 Cytochrome b subunit of the bc complex.
  
 0.884
C357_13917
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.857
C357_14726
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.857
C357_00639
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 0.843
C357_00634
COG3278 Cbb3-type cytochrome oxidase, subunit 1.
  
 0.831
C357_07321
Putative thioredoxin, thioldisulfide interchange protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
   0.822
C357_07326
Periplasmic protein thiol--disulfide oxidoreductase DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
   0.815
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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