STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_07491Manganese transport regulator MntR; COG1321 Mn-dependent transcriptional regulator. (150 aa)    
Predicted Functional Partners:
C357_09772
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.901
C357_09373
Hypothetical protein.
     
 0.894
C357_13762
ABC-3 metal transporter; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 
 0.881
C357_13767
ABC-3 protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 
 0.881
C357_14421
Zinc ABC transporter, permease protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 
 0.881
C357_00599
COG4166 ABC-type oligopeptide transport system, periplasmic component.
   
 
  0.858
C357_01169
YjgP/YjgQ family permease; COG0795 Predicted permeases.
    
  0.858
C357_01174
Hypothetical protein; COG0795 Predicted permeases.
    
  0.858
C357_03046
Putative extracellular solute-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
   
 
  0.858
C357_20600
COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
    
  0.857
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.