Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C357_08006COG0477 Permeases of the major facilitator superfamily. (422 aa)    
Predicted Functional Partners:
C357_07996
COG1960 Acyl-CoA dehydrogenases.
       0.773
C357_08001
Hypothetical protein.
       0.773
C357_05229
Extracellular solute-binding protein, family 1; COG0642 Signal transduction histidine kinase.
  
  
 0.653
C357_06794
COG0477 Permeases of the major facilitator superfamily.
  
 
0.653
C357_14369
Nitrite extrusion protein; COG2223 Nitrate/nitrite transporter.
    
 0.621
C357_01104
Extracellular solute-binding protein, family 1 precursor; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.581
C357_20090
COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.581
C357_09154
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
     
 0.527
C357_18572
Sensor histidine kinase/response regulator GacS; COG0642 Signal transduction histidine kinase.
    
 0.509
C357_14349
COG2181 Nitrate reductase gamma subunit.
    
  0.507
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (12%) [HD]