Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C357_08036COG1804 Predicted acyl-CoA transferases/carnitine dehydratase. (404 aa)    
Predicted Functional Partners:
C357_08041
COG1024 Enoyl-CoA hydratase/carnithine racemase.
    
  0.810
C357_08046
COG1960 Acyl-CoA dehydrogenases.
  
 
  0.780
C357_08051
acyl-CoA dehydrogenase-like protein; COG1960 Acyl-CoA dehydrogenases.
  
 
  0.780
C357_08031
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
    
  0.779
C357_21975
COG2301 Citrate lyase beta subunit.
 
 
 
  0.540
C357_10207
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.530
C357_22630
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.530
C357_13637
COG0281 Malic enzyme.
     
 0.518
C357_15081
COG0281 Malic enzyme.
     
 0.518
C357_16081
Hydro-lyase; COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; overlaps another CDS with the same product name.
     
  0.497
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.