STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_08041COG1024 Enoyl-CoA hydratase/carnithine racemase. (264 aa)    
Predicted Functional Partners:
C357_21480
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.982
C357_18572
Sensor histidine kinase/response regulator GacS; COG0642 Signal transduction histidine kinase.
    
 0.920
C357_03990
COG0642 Signal transduction histidine kinase.
    
 0.904
C357_08051
acyl-CoA dehydrogenase-like protein; COG1960 Acyl-CoA dehydrogenases.
 
  0.871
C357_18662
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
    
 0.858
C357_08046
COG1960 Acyl-CoA dehydrogenases.
  
  0.844
C357_16376
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
    
 0.839
C357_16591
Sensory box sensor histidine kinase/response regulator; COG5002 Signal transduction histidine kinase.
    
 0.839
C357_22585
Sensor histidine kinase/response regulator receiver protein; COG0642 Signal transduction histidine kinase.
    
 0.839
C357_08036
COG1804 Predicted acyl-CoA transferases/carnitine dehydratase.
    
  0.810
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.