STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_08046COG1960 Acyl-CoA dehydrogenases. (378 aa)    
Predicted Functional Partners:
C357_10734
acyl-CoA dehydrogenase-like protein; COG1960 Acyl-CoA dehydrogenases; overlaps another CDS with the same product name.
 
     0.959
C357_08051
acyl-CoA dehydrogenase-like protein; COG1960 Acyl-CoA dehydrogenases.
     0.952
C357_10834
COG1960 Acyl-CoA dehydrogenases.
 
    
0.929
C357_03610
Fatty acid oxidation complex alpha subunit, putative; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.925
C357_08041
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
  0.844
C357_10859
COG1960 Acyl-CoA dehydrogenases; overlaps another CDS with the same product name.
 
     0.844
C357_08036
COG1804 Predicted acyl-CoA transferases/carnitine dehydratase.
  
 
  0.780
C357_08031
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
  0.770
C357_08241
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
    
 0.702
C357_10904
Thiolase; Overlaps another CDS with the same product name.
  
  0.687
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.