Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C357_08096Hypothetical protein. (202 aa)    
Predicted Functional Partners:
flgD
Flagellar basal body rod modification protein; COG1843 Flagellar hook capping protein.
 
 
 0.996
C357_08086
Flagellar protein FlgJ, putative; COG3951 Rod binding protein.
 
  
 0.978
fliE
COG1677 Flagellar hook-basal body protein.
 
  
 0.968
C357_04807
COG1536 Flagellar motor switch protein.
 
  
 0.968
C357_16626
Flagellar basal body-associated protein FliL.
 
  
 0.968
flgB
COG1815 Flagellar basal body protein.
 
  
 0.950
C357_16636
Hypothetical protein.
 
  
 0.950
C357_16616
Flagellar biosynthesis/type III secretory pathway protein FliH; COG5178 U5 snRNP spliceosome subunit.
 
  
 0.946
fliF
Flagellar MS-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
  
 0.946
C357_14062
Surface presentation of antigens (SPOA) protein.
 
  
 0.945
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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