Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C357_08321COG0438 Glycosyltransferase. (431 aa)    
Predicted Functional Partners:
C357_08326
Hypothetical protein.
 
 
  0.930
C357_08336
COG0438 Glycosyltransferase.
 
  
  0.832
C357_08236
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
 
  0.808
C357_08251
Non-ribosomal peptide synthetase; COG0223 Methionyl-tRNA formyltransferase.
  
  
 0.803
C357_08261
Lipopolysaccharide biosynthesis; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
  0.772
C357_08281
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.762
C357_08311
Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
 
    0.761
C357_08276
Gfo/Idh/MocA family oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.750
C357_08191
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.748
C357_08231
Glycosyl transferase, group 2 family protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
 
  0.742
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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