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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_08680COG2207 AraC-type DNA-binding domain-containing proteins. (287 aa)    
Predicted Functional Partners:
C357_18876
COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.
    
 
 0.755
C357_16016
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
    
  0.715
C357_08685
COG1349 Transcriptional regulators of sugar metabolism.
     
 0.695
C357_08695
Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis.
 
     0.682
C357_14496
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.674
C357_00150
COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
 0.628
C357_15081
COG0281 Malic enzyme.
  
  
 0.624
C357_13637
COG0281 Malic enzyme.
     
 0.565
C357_08690
Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis.
 
     0.560
C357_03990
COG0642 Signal transduction histidine kinase.
   
 
 0.435
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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