STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_08695Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis. (316 aa)    
Predicted Functional Partners:
C357_08690
Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis.
 
    
0.840
C357_08640
COG0830 Urease accessory protein UreF.
  
     0.766
C357_00229
Hypothetical protein.
  
     0.730
C357_08680
COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.682
C357_08700
Allantoate amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
     0.630
C357_05713
COG0510 Predicted choline kinase involved in LPS biosynthesis.
  
     0.595
C357_02179
COG1609 Transcriptional regulators.
  
     0.553
C357_08685
COG1349 Transcriptional regulators of sugar metabolism.
 
     0.549
C357_08670
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
    0.540
C357_14481
COG0583 Transcriptional regulator.
  
     0.530
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (18%) [HD]